BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H05SP1|AL430303
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig871 1756 0.0
>3x_Contig871
Length = 4172
Score = 1756 bits (885), Expect = 0.0
Identities = 899/901 (99%), Gaps = 2/901 (0%)
Strand = Plus / Minus
Query: 2 tggataacatcattatacgccgttccatattctgatattttcatttcaggatcctggaat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1608 tggataacatcattatacgccgttccatattctgatattttcatttcaggatcctggaat 1549
Query: 62 ggaaccctgaaggtatggaaaatcaatgagaacttaagagcatttgaactattaggagac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1548 ggaaccctgaaggtatggaaaatcaatgagaacttaagagcatttgaactattaggagac 1489
Query: 122 ttacctaactgtaaaggtgtggtaaccaaaattcaagccgtagaatccggcagaaccggt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1488 ttacctaactgtaaaggtgtggtaaccaaaattcaagccgtagaatccggcagaaccggt 1429
Query: 182 agagaaaccttcagaattctagcaagtgtcagtaaagaacatagattaggaagatggatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1428 agagaaaccttcagaattctagcaagtgtcagtaaagaacatagattaggaagatggatt 1369
Query: 242 agcaaggtaccaggtgcaagaaatggtatcttttctgctgtgatagaacaaaccggattc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 agcaaggtaccaggtgcaagaaatggtatcttttctgctgtgatagaacaaaccggattc 1309
Query: 302 tagttaatcttatcaatagaaaaatctcctgtatagtaaaaagaagaatactttaataaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 tagttaatcttatcaatagaaaaatctcctgtatagtaaaaagaagaatactttaataaa 1249
Query: 362 gccgaaatacattagtaattgttacaagggtatatatttatatatagagagctctaaccg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 gccgaaatacattagtaattgttacaagggtatatatttatatatagagagctctaaccg 1189
Query: 422 atcaatgatgtagagaactaggaaaggattaatagaaatcattgtgacatgattttgagt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 atcaatgatgtagagaactaggaaaggattaatagaaatcattgtgacatgattttgagt 1129
Query: 482 agtgtctttcattgtcagccatgataaaataaggtgttagagaacgaatttgagaacaga 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 agtgtctttcattgtcagccatgataaaataaggtgttagagaacgaatttgagaacaga 1069
Query: 542 taagatttaattcacatagccagcgacgtagagaattaaatgcgggaacatcaaaggaat 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 taagatttaattcacatagccagcgacgtagagaattaaatgcgggaacatcaaaggaat 1009
Query: 602 agctcaaaggattaaaggaaaagatcgggaaaagtcaaatggatttttttattttaagta 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 agctcaaaggattaaaggaaaagatcgggaaaagtcaaatggatttttttattttaagta 949
Query: 662 ttaagcgttcctcatgttcttgtaaacaagcaaggaacgaaagagtaataaacaacacaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 ttaagcgttcctcatgttcttgtaaacaagcaaggaacgaaagagtaataaacaacacaa 889
Query: 722 atcgtctcaagagaaagcaaacaactcccaaagtaaaggaatcataggaaggccaaagca 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 atcgtctcaagagaaagcaaacaactcccaaagtaaaggaatcataggaaggccaaagca 829
Query: 782 ataccagcggca-caccaatcaaagcgtcgttaattcc-acttggtaagcagcaccagta 839
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 828 ataccagcggcagcaccaatcaaagcgtcgttaattccaacttggtaagcagcaccagta 769
Query: 840 gactctgaagtgcctgaagtggaagccccggtagaagaatcacttgtcaaggaagtcaaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gactctgaagtgcctgaagtggaagccccggtagaagaatcacttgtcaaggaagtcaaa 709
Query: 900 g 900
|
Sbjct: 708 g 708
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7608
Number of Sequences: 1807
Number of extensions: 7608
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)